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Bioinformatics Option for Biology Majors

Goal Curriculum Sample Sequence Advisors

Purpose and Goals

     With the advent of genomics and proteomics, biology is evolving from a mainly  experimental  science  performed  at  the  bench  to  one  in  which  large  databases  of  information and computer models play a significant role.  The analysis of many complex  biological systems such as neuronal patterning, integrated metabolic pathways, and genes  involved in signal transduction networks, requires that the research biologist have more  than  just  a  passing  understanding  of  computers  and  their  use  in  modern  biological  research.  Today’s biology students must therefore not only learn to perform in vivo and  in vitro, but also must become familiar with in silico research.

    Bioinformatics is a burgeoning field with plentiful career opportunities.  People  working  in this  field  must have a solid  background  in  biology,  math  and computer  science with an emphasis on quantitative reasoning.  The curriculum for a bioinformatics  concentration would give biology majors a minor in computer science. Our goal is to  prepare undergraduate students majoring in biology for employment as  bioinformaticists  in  biomedical  research  and for graduate training  in bioinformatics at both the  Master’s and the Ph.D. levels.

Curriculum (69-71 credits)

     Students concentrating in bioinformatics will fulfill the requirements for the  Biology Major with three differences.  First, they will have one extra semester of math.   Second, two biology courses will be replaced with 2 computer science courses with labs.   Third, instead of taking 10 credits of upper division biology electives, they will take 10  credits of upper division Chemistry, Anthropology, Math and Biology electives.  Below  is the curriculum developed for the Bioinformatics concentration. 

Required

BIOL 100 Principles of Biology I   4.5 cr. 
BIOL 102 Principles of Biology II  4.5 cr. 
BIOL 200 Cell Biology I    4.5 cr. OR  BIOL 202 Cell Biology II    4.5 cr.
BIOL 300 Biological Chemistry  4.5 cr. OR  BIOL 302 Molecular Genetics  4.5 cr.   

CHEM 102 General Chemistry I    3 cr. 
CHEM 103 General Chemistry I Lab   1.5 cr. 
CHEM 104 General Chemistry II     3 cr. 
CHEM 105 General Chemistry II Lab  1.5 cr. 
CHEM 222 Organic Chemistry I     3 cr. 
CHEM 224 Organic Chemistry II     3 cr.   

STAT 213 Intro Applied Statistics  3 cr. 
MATH 150 Calculus I  4 cr. 
MATH 155 Calculus II  4 cr.   

PHYS 110 or 111 General Physics I 4.5 or 5.5 cr. 
PHYS 120 or 121 General Physics II 4.5 or 5.5 cr.   

CSCI 132 Practical UNIX   3 cr. (NEW) 
CSCI 232 Relational Database   3 cr. (NEW)   

Electives (10 credits – must take BIOL 471 and BIOL 425)

BIOL 471 Special Topics (Genomics, Proteomics, or Protein Structure)  2 cr. 
BIOL 375 Molecular Evolution 3cr.
BIOL 425 Computat. Molec. Biol.   3 cr. (NEW) 
ANTHP 302 Human Genetics  3 cr. 
CHEM 388 Chemical Genomics  3 cr. (NEW) 
STAT 319 Bayesian Inference  3 cr. (NEW)

TOTAL CREDITS – 69 TO 71 CREDITS 

Sample Course Sequence*

*Please see advisor for individualized course plans

Fall (Year 1) – 9 credits

BIOL 100     (4.5 credits)
CHEM 102  (3 credits)
CHEM 103  (1.5 credits)
Spring (Year 1) – 12 credits

BIOL 102     (4.5 credits)
CHEM 104  (3 credits)
CHEM 105  (1.5 credits)
STAT 213    (3 credits)
Fall (Year 2) – 12 credits

BIOL 200     (4.5 credits)   
PHYS 110   (4.5 credits)
CHEM 222  (3 credits)
Spring (Year 2) – 11.5 credits        

CHEM 224  (3 credits)   
PHYS 120    (4.5 credits)    
MATH 150   (4 credits) 
Fall (Year 3) – 7.5 credits

BIOL 300     (4.5 credits)   
CSCI 132    (3 credits)
Spring (Year 3) – 7 credits        

CSCI 232  (3 credits)        
MATH 155   (4 credits)
Fall (Year 4) – 5 credits

BIOL 471     (2 credits)   
STAT 319   (3 credits)
Spring (Year 4) – 5 credits        

BIOL 471  (2 credits)   
BIOL 425  (3 credits)    

Faculty Advisors

Dr Weigang Qiu (212-772-5296, Office Hour: Tu 3-5pm, weigang at genectr dot hunter dot cuny dot edu)

Dr Adrienne Alaie (212-772-3238, alaie at genectr dot hunter dot cuny dot edu)

©Hunter College
2007-2008
Document made with Nvu
Acknowledgments
National Institutes of Health (NIH)/MARC Program
Howard Hughes Medical Institute (HHMI)

Center for the Study of Gene Structure and Function